Because we added drf-yasg and pinned djangorestframework

The xblock counting script had a requirements file that was not
previously being tracked and had an out of date version of requests.
Add it to the `upgrade` make target so that it stays up to date.

* Updating Python Requirements

* Don't rely on pip-compile cache

* Fix tornado dependency resolution

Bumping edx-organizations will add history to the Organization model.

DE-1510

Changelog: http://docs.gunicorn.org/en/stable/2016-news.html

See https://github.com/edx/edx-platform/pull/20644 for original
attempt at disabling, and more info about why.

ENT-1885

This also pins scipy to version <=1.2.1 in constraints.txt, as 1.3.0 requires py3.5 or above